Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP3BO95985 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.88■□□□□ 0.29
TOP3BO95985 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TOP3BO95985 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP3BO95985 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP3BO95985 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TOP3BO95985 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.88■□□□□ 0.29
TOP3BO95985 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TOP3BO95985 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.88■□□□□ 0.29
TOP3BO95985 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TOP3BO95985 AP005018.1-201ENST00000525475 301 ntBASIC16.88■□□□□ 0.29
TOP3BO95985 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP3BO95985 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.88■□□□□ 0.29
TOP3BO95985 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.88■□□□□ 0.29
TOP3BO95985 AC010654.1-201ENST00000615722 808 ntBASIC16.88■□□□□ 0.29
TOP3BO95985 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TOP3BO95985 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP3BO95985 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP3BO95985 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.88■□□□□ 0.29
TOP3BO95985 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TOP3BO95985 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TOP3BO95985 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 AL513523.2-202ENST00000427283 2040 ntBASIC16.87■□□□□ 0.29
TOP3BO95985 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TOP3BO95985 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.87■□□□□ 0.29
TOP3BO95985 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 TFAMP1-201ENST00000412727 736 ntBASIC16.87■□□□□ 0.29
TOP3BO95985 RHOQP3-201ENST00000437982 621 ntBASIC16.87■□□□□ 0.29
TOP3BO95985 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP3BO95985 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.87■□□□□ 0.29
TOP3BO95985 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.87■□□□□ 0.29
TOP3BO95985 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TOP3BO95985 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
TOP3BO95985 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.87■□□□□ 0.29
TOP3BO95985 OR7E47P-204ENST00000575924 449 ntBASIC16.87■□□□□ 0.29
TOP3BO95985 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.87■□□□□ 0.29
TOP3BO95985 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
TOP3BO95985 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TOP3BO95985 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TOP3BO95985 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.87■□□□□ 0.29
TOP3BO95985 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.86■□□□□ 0.29
TOP3BO95985 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.86■□□□□ 0.29
TOP3BO95985 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.86■□□□□ 0.29
TOP3BO95985 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TOP3BO95985 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 AC097637.2-201ENST00000624096 1997 ntBASIC16.86■□□□□ 0.29
TOP3BO95985 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TOP3BO95985 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TOP3BO95985 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TOP3BO95985 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.85■□□□□ 0.29
TOP3BO95985 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TOP3BO95985 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TOP3BO95985 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms