Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC24.16■■□□□ 1.46
RAPGEF3O95398 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RAPGEF3O95398 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RAPGEF3O95398 AL645728.1-201ENST00000366221 2101 ntBASIC24.16■■□□□ 1.46
RAPGEF3O95398 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 AC018735.1-201ENST00000437208 1502 ntBASIC24.15■■□□□ 1.46
RAPGEF3O95398 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 RN7SL769P-201ENST00000469386 295 ntBASIC24.15■■□□□ 1.46
RAPGEF3O95398 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 AC078819.1-201ENST00000547454 765 ntBASIC24.15■■□□□ 1.46
RAPGEF3O95398 AC012085.1-201ENST00000548270 765 ntBASIC24.15■■□□□ 1.46
RAPGEF3O95398 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 AC025279.2-201ENST00000569730 653 ntBASIC24.15■■□□□ 1.46
RAPGEF3O95398 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 AC135050.7-201ENST00000624508 2218 ntBASIC24.15■■□□□ 1.46
RAPGEF3O95398 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RAPGEF3O95398 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC24.15■■□□□ 1.46
RAPGEF3O95398 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RAPGEF3O95398 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RAPGEF3O95398 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RAPGEF3O95398 AHCYP2-201ENST00000430630 1300 ntBASIC24.14■■□□□ 1.46
RAPGEF3O95398 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC24.14■■□□□ 1.46
RAPGEF3O95398 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC24.14■■□□□ 1.46
RAPGEF3O95398 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RAPGEF3O95398 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
RAPGEF3O95398 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC24.14■■□□□ 1.45
RAPGEF3O95398 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 FAM197Y7-201ENST00000432892 766 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 IMP3P2-201ENST00000489760 475 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 RPSAP36-202ENST00000494591 1261 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 AC022137.2-201ENST00000503482 481 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 AC104982.3-201ENST00000581995 514 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 AC020914.3-201ENST00000594712 304 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC24.14■■□□□ 1.45
RAPGEF3O95398 REXO1L8P-201ENST00000604378 1897 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC24.14■■□□□ 1.45
RAPGEF3O95398 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC24.14■■□□□ 1.45
RAPGEF3O95398 AC138627.1-207ENST00000641560 1006 ntBASIC24.14■■□□□ 1.45
RAPGEF3O95398 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
RAPGEF3O95398 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC24.14■■□□□ 1.45
RAPGEF3O95398 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
RAPGEF3O95398 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAPGEF3O95398 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 AC092978.1-202ENST00000637590 1327 ntBASIC24.13■■□□□ 1.45
RAPGEF3O95398 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 MIR33B-201ENST00000385104 96 ntBASIC24.13■■□□□ 1.45
RAPGEF3O95398 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 ELP6-209ENST00000446787 894 ntTSL 3 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAPGEF3O95398 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC24.13■■□□□ 1.45
RAPGEF3O95398 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAPGEF3O95398 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms