Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CILPO75339 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CILPO75339 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.36■□□□□ 0.37
CILPO75339 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.36■□□□□ 0.37
CILPO75339 TSEN15P1-201ENST00000423257 515 ntBASIC17.36■□□□□ 0.37
CILPO75339 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.36■□□□□ 0.37
CILPO75339 RNA5SP410-201ENST00000516285 106 ntBASIC17.36■□□□□ 0.37
CILPO75339 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.36■□□□□ 0.37
CILPO75339 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.36■□□□□ 0.37
CILPO75339 MIR4321-201ENST00000592276 80 ntBASIC17.36■□□□□ 0.37
CILPO75339 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.36■□□□□ 0.37
CILPO75339 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.36■□□□□ 0.37
CILPO75339 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.36■□□□□ 0.37
CILPO75339 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.36■□□□□ 0.37
CILPO75339 AP001059.3-201ENST00000619053 235 ntBASIC17.36■□□□□ 0.37
CILPO75339 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.36■□□□□ 0.37
CILPO75339 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CILPO75339 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CILPO75339 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.36■□□□□ 0.37
CILPO75339 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.35■□□□□ 0.37
CILPO75339 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CILPO75339 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.35■□□□□ 0.37
CILPO75339 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CILPO75339 METTL21AP1-201ENST00000438852 635 ntBASIC17.35■□□□□ 0.37
CILPO75339 AC109322.1-201ENST00000524499 1264 ntBASIC17.35■□□□□ 0.37
CILPO75339 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.35■□□□□ 0.37
CILPO75339 AL512356.2-201ENST00000546955 174 ntBASIC17.35■□□□□ 0.37
CILPO75339 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.35■□□□□ 0.37
CILPO75339 AC024267.1-201ENST00000582320 895 ntBASIC17.35■□□□□ 0.37
CILPO75339 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CILPO75339 LINC00628-201ENST00000628516 1289 ntBASIC17.35■□□□□ 0.37
CILPO75339 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.35■□□□□ 0.37
CILPO75339 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.35■□□□□ 0.37
CILPO75339 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.35■□□□□ 0.37
CILPO75339 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CILPO75339 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CILPO75339 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CILPO75339 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CILPO75339 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.34■□□□□ 0.37
CILPO75339 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.34■□□□□ 0.37
CILPO75339 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.34■□□□□ 0.37
CILPO75339 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.34■□□□□ 0.37
CILPO75339 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CILPO75339 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.34■□□□□ 0.37
CILPO75339 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.34■□□□□ 0.37
CILPO75339 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CILPO75339 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms