Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 CYP4F24P-201ENST00000586049 1580 ntBASIC19.63■□□□□ 0.73
SEMA3EO15041 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.63■□□□□ 0.73
SEMA3EO15041 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
SEMA3EO15041 FO393414.2-201ENST00000405153 598 ntBASIC19.63■□□□□ 0.73
SEMA3EO15041 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SEMA3EO15041 AC114501.2-201ENST00000439631 535 ntBASIC19.63■□□□□ 0.73
SEMA3EO15041 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.63■□□□□ 0.73
SEMA3EO15041 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.63■□□□□ 0.73
SEMA3EO15041 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.63■□□□□ 0.73
SEMA3EO15041 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SEMA3EO15041 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 AC106886.4-201ENST00000623557 2502 ntBASIC19.63■□□□□ 0.73
SEMA3EO15041 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA3EO15041 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA3EO15041 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.62■□□□□ 0.73
SEMA3EO15041 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SEMA3EO15041 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA3EO15041 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA3EO15041 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SEMA3EO15041 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.62■□□□□ 0.73
SEMA3EO15041 SDHAP3-202ENST00000515467 728 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.62■□□□□ 0.73
SEMA3EO15041 AC135586.1-201ENST00000539323 574 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.62■□□□□ 0.73
SEMA3EO15041 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA3EO15041 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SEMA3EO15041 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SEMA3EO15041 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 RN7SL832P-201ENST00000607781 1756 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA3EO15041 AC012313.1-201ENST00000593393 3059 ntBASIC19.62■□□□□ 0.73
SEMA3EO15041 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA3EO15041 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA3EO15041 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA3EO15041 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.61■□□□□ 0.73
SEMA3EO15041 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.61■□□□□ 0.73
SEMA3EO15041 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SEMA3EO15041 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SEMA3EO15041 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
SEMA3EO15041 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SEMA3EO15041 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.61■□□□□ 0.73
SEMA3EO15041 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.61■□□□□ 0.73
SEMA3EO15041 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.61■□□□□ 0.73
SEMA3EO15041 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
SEMA3EO15041 AC027307.3-201ENST00000594262 1100 ntBASIC19.61■□□□□ 0.73
SEMA3EO15041 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.61■□□□□ 0.73
SEMA3EO15041 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.61■□□□□ 0.73
SEMA3EO15041 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.61■□□□□ 0.73
SEMA3EO15041 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 AL136982.4-201ENST00000437689 1740 ntBASIC19.61■□□□□ 0.73
SEMA3EO15041 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SEMA3EO15041 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
SEMA3EO15041 ME2P1-201ENST00000426028 1970 ntBASIC19.61■□□□□ 0.73
SEMA3EO15041 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.61■□□□□ 0.73
SEMA3EO15041 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEMA3EO15041 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SEMA3EO15041 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA3EO15041 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SEMA3EO15041 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.6■□□□□ 0.73
SEMA3EO15041 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SEMA3EO15041 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SEMA3EO15041 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SEMA3EO15041 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms