Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RGPD3A6NKT7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 MIR3907-201ENST00000579424 151 ntBASIC20.29■□□□□ 0.84
RGPD3A6NKT7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 KRT18P25-201ENST00000508931 1278 ntBASIC20.29■□□□□ 0.84
RGPD3A6NKT7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 AC134698.3-201ENST00000523880 214 ntBASIC20.29■□□□□ 0.84
RGPD3A6NKT7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.29■□□□□ 0.84
RGPD3A6NKT7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 AL691432.1-201ENST00000596308 1422 ntBASIC20.28■□□□□ 0.84
RGPD3A6NKT7 PCDHB17P-201ENST00000539533 2393 ntBASIC20.28■□□□□ 0.84
RGPD3A6NKT7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 RN7SL555P-201ENST00000584742 339 ntBASIC20.28■□□□□ 0.84
RGPD3A6NKT7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RGPD3A6NKT7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 IQSEC3P1-201ENST00000538799 536 ntBASIC20.27■□□□□ 0.84
RGPD3A6NKT7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RGPD3A6NKT7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RGPD3A6NKT7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RGPD3A6NKT7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 RNU1-114P-201ENST00000365297 166 ntBASIC20.26■□□□□ 0.83
RGPD3A6NKT7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 PRKXP1-201ENST00000561423 1122 ntBASIC20.26■□□□□ 0.83
RGPD3A6NKT7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.26■□□□□ 0.83
RGPD3A6NKT7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms