Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SBNO1A3KN83 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SBNO1A3KN83 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SBNO1A3KN83 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SBNO1A3KN83 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 BRWD1P1-201ENST00000401091 371 ntBASIC21.92■■□□□ 1.1
SBNO1A3KN83 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SBNO1A3KN83 AC068587.3-201ENST00000526613 355 ntBASIC21.92■■□□□ 1.1
SBNO1A3KN83 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 AC124283.3-201ENST00000570869 594 ntBASIC21.92■■□□□ 1.1
SBNO1A3KN83 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SBNO1A3KN83 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SBNO1A3KN83 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.92■■□□□ 1.1
SBNO1A3KN83 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SBNO1A3KN83 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SBNO1A3KN83 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 AP001889.1-201ENST00000525414 633 ntBASIC21.91■■□□□ 1.1
SBNO1A3KN83 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 AL139099.5-201ENST00000635274 300 ntBASIC21.91■■□□□ 1.1
SBNO1A3KN83 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.91■■□□□ 1.1
SBNO1A3KN83 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SBNO1A3KN83 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 AL359711.2-201ENST00000563105 872 ntBASIC21.9■■□□□ 1.1
SBNO1A3KN83 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.9■■□□□ 1.1
SBNO1A3KN83 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SBNO1A3KN83 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SBNO1A3KN83 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SBNO1A3KN83 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SBNO1A3KN83 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.89■■□□□ 1.1
SBNO1A3KN83 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms