Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 AL031432.2-201ENST00000566714 459 ntBASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 AL928711.1-201ENST00000570165 459 ntBASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 DBET-201ENST00000630918 3363 ntBASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 MIR648-201ENST00000385046 94 ntBASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 HCG4B-203ENST00000450128 991 ntBASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 AC021097.1-201ENST00000607902 574 ntBASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 AC092919.2-201ENST00000623631 1645 ntBASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV7S3A2A0A539 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 RNA5SP415-201ENST00000517246 115 ntBASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 AC104640.1-201ENST00000562617 2109 ntBASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 MIR3909-201ENST00000579518 119 ntBASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 AC010507.1-201ENST00000633895 436 ntBASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 AL645728.2-201ENST00000641974 660 ntBASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 AC103702.1-201ENST00000548801 2630 ntBASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV7S3A2A0A539 AC073347.1-201ENST00000421633 2643 ntBASIC16.67■□□□□ 0.26
TCRBV7S3A2A0A539 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV7S3A2A0A539 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms