Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AC136632.2-201ENST00000512891 861 ntBASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 OR7E14P-202ENST00000530490 1290 ntBASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 MIR1199-201ENST00000621445 119 ntBASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms