Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTDP1Q9Y5B0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AC068587.6-202ENST00000641839 5619 ntBASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AL512652.2-201ENST00000625156 1716 ntBASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 RN7SL828P-201ENST00000607615 303 ntBASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.95■□□□□ 0.62
CTDP1Q9Y5B0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AC004890.2-204ENST00000481968 304 ntBASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AC105021.1-202ENST00000570572 669 ntBASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AC239800.4-201ENST00000603712 296 ntBASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 AC009118.2-201ENST00000613275 655 ntBASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTDP1Q9Y5B0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 AC022144.1-201ENST00000602255 1580 ntBASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 GPAA1P2-202ENST00000606848 1787 ntBASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms