Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 AL596087.1-201ENST00000400979 1969 ntBASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 FAM58DP-201ENST00000428076 619 ntBASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 CNN2P11-201ENST00000429351 262 ntBASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 DNAJB3-202ENST00000449667 1266 ntBASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 AL691403.2-201ENST00000618460 490 ntBASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 AC139530.3-201ENST00000620344 690 ntBASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHA4Q9UN74 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 AL596442.2-201ENST00000610240 980 ntBASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHA4Q9UN74 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms