Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 CYMP-203ENST00000474680 1263 ntBASIC17.49■□□□□ 0.39
SIX4Q9UIU6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 AC024267.1-201ENST00000582320 895 ntBASIC17.49■□□□□ 0.39
SIX4Q9UIU6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 AL365330.1-201ENST00000607459 531 ntBASIC17.49■□□□□ 0.39
SIX4Q9UIU6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIX4Q9UIU6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 FAM86GP-201ENST00000448322 971 ntBASIC17.48■□□□□ 0.39
SIX4Q9UIU6 KLF2P3-201ENST00000451977 1087 ntBASIC17.48■□□□□ 0.39
SIX4Q9UIU6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 DUX4L27-201ENST00000554796 1261 ntBASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AC093512.1-201ENST00000617969 520 ntBASIC17.48■□□□□ 0.39
SIX4Q9UIU6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SIX4Q9UIU6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.47■□□□□ 0.39
SIX4Q9UIU6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 AC105021.1-202ENST00000570572 669 ntBASIC17.47■□□□□ 0.39
SIX4Q9UIU6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIX4Q9UIU6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms