Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC112191.1-201ENST00000523689 701 ntBASIC16.67■□□□□ 0.26
HACD3Q9P035 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.67■□□□□ 0.26
HACD3Q9P035 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.67■□□□□ 0.26
HACD3Q9P035 AL161645.1-201ENST00000622716 1255 ntBASIC16.67■□□□□ 0.26
HACD3Q9P035 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.67■□□□□ 0.26
HACD3Q9P035 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.67■□□□□ 0.26
HACD3Q9P035 AC092865.6-201ENST00000642101 219 ntBASIC16.67■□□□□ 0.26
HACD3Q9P035 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.67■□□□□ 0.26
HACD3Q9P035 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 LINC01144-201ENST00000626198 1710 ntBASIC16.67■□□□□ 0.26
HACD3Q9P035 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.67■□□□□ 0.26
HACD3Q9P035 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 PMS2P7-201ENST00000506558 1336 ntBASIC16.67■□□□□ 0.26
HACD3Q9P035 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.67■□□□□ 0.26
HACD3Q9P035 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HACD3Q9P035 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.66■□□□□ 0.26
HACD3Q9P035 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HACD3Q9P035 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.66■□□□□ 0.26
HACD3Q9P035 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 AC092474.2-201ENST00000424288 719 ntBASIC16.66■□□□□ 0.26
HACD3Q9P035 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 POLD2P1-201ENST00000511220 997 ntBASIC16.66■□□□□ 0.26
HACD3Q9P035 PGAM5P1-201ENST00000518923 814 ntBASIC16.66■□□□□ 0.26
HACD3Q9P035 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.66■□□□□ 0.26
HACD3Q9P035 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.66■□□□□ 0.26
HACD3Q9P035 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
HACD3Q9P035 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HACD3Q9P035 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HACD3Q9P035 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 AC092171.3-201ENST00000610122 2651 ntBASIC16.65■□□□□ 0.26
HACD3Q9P035 PCGF3-213ENST00000620529 1899 ntBASIC16.65■□□□□ 0.26
HACD3Q9P035 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 PCDH8P1-201ENST00000428983 2773 ntBASIC16.65■□□□□ 0.26
HACD3Q9P035 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.65■□□□□ 0.26
HACD3Q9P035 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 AC004832.2-201ENST00000426397 482 ntBASIC16.65■□□□□ 0.26
HACD3Q9P035 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.65■□□□□ 0.26
HACD3Q9P035 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.65■□□□□ 0.26
HACD3Q9P035 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.65■□□□□ 0.26
HACD3Q9P035 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HACD3Q9P035 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
HACD3Q9P035 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
HACD3Q9P035 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HACD3Q9P035 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms