Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTA1Q9NP79 CYP4F24P-201ENST00000586049 1580 ntBASIC18.25■□□□□ 0.51
VTA1Q9NP79 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.25■□□□□ 0.51
VTA1Q9NP79 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 ATP5G2P4-201ENST00000442175 420 ntBASIC18.24■□□□□ 0.51
VTA1Q9NP79 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC023310.3-201ENST00000557027 670 ntBASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC100756.1-201ENST00000562736 682 ntBASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC138749.3-201ENST00000567691 622 ntBASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC074044.1-201ENST00000609673 707 ntBASIC18.24■□□□□ 0.51
VTA1Q9NP79 AC116165.1-201ENST00000611806 668 ntBASIC18.24■□□□□ 0.51
VTA1Q9NP79 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 AL645608.8-201ENST00000606034 2086 ntBASIC18.24■□□□□ 0.51
VTA1Q9NP79 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTA1Q9NP79 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
VTA1Q9NP79 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 AC105020.1-201ENST00000435356 2205 ntBASIC18.23■□□□□ 0.51
VTA1Q9NP79 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 AL589987.1-201ENST00000453380 819 ntBASIC18.23■□□□□ 0.51
VTA1Q9NP79 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 AC025048.3-201ENST00000590609 569 ntBASIC18.23■□□□□ 0.51
VTA1Q9NP79 AC005702.4-201ENST00000618393 416 ntBASIC18.23■□□□□ 0.51
VTA1Q9NP79 MIR6752-201ENST00000618442 71 ntBASIC18.23■□□□□ 0.51
VTA1Q9NP79 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 AC005915.1-201ENST00000624912 2018 ntBASIC18.23■□□□□ 0.51
VTA1Q9NP79 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 AL136982.4-201ENST00000437689 1740 ntBASIC18.23■□□□□ 0.51
VTA1Q9NP79 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VTA1Q9NP79 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VTA1Q9NP79 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.22■□□□□ 0.51
VTA1Q9NP79 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VTA1Q9NP79 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms