Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.02■□□□□ -0
HMG20AQ9NP66 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.02■□□□□ -0
HMG20AQ9NP66 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.02■□□□□ -0
HMG20AQ9NP66 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HMG20AQ9NP66 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
HMG20AQ9NP66 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.02■□□□□ -0
HMG20AQ9NP66 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.02■□□□□ -0
HMG20AQ9NP66 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.02■□□□□ -0
HMG20AQ9NP66 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.02■□□□□ -0
HMG20AQ9NP66 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.02■□□□□ -0
HMG20AQ9NP66 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.02■□□□□ -0
HMG20AQ9NP66 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.02■□□□□ -0
HMG20AQ9NP66 VENTXP5-201ENST00000523979 775 ntBASIC15.02■□□□□ -0
HMG20AQ9NP66 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 AC005332.3-201ENST00000589904 676 ntBASIC15.02■□□□□ -0
HMG20AQ9NP66 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HMG20AQ9NP66 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.02■□□□□ -0
HMG20AQ9NP66 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.02■□□□□ -0
HMG20AQ9NP66 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 PRAL-201ENST00000624952 3286 ntBASIC15.02□□□□□ -0.01
HMG20AQ9NP66 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.02□□□□□ -0.01
HMG20AQ9NP66 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 CICP14-201ENST00000629111 2732 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 TUBB8P12-201ENST00000308911 1335 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 TUBB7P-202ENST00000428444 1305 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 TUBB8P7-204ENST00000567960 1332 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 MTCL1P1-201ENST00000446207 792 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 AC068472.1-201ENST00000474589 881 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 AC063952.2-201ENST00000498792 1227 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 AL390719.2-201ENST00000606993 987 ntBASIC15.01□□□□□ -0.01
HMG20AQ9NP66 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HMG20AQ9NP66 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HMG20AQ9NP66 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HMG20AQ9NP66 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMG20AQ9NP66 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMG20AQ9NP66 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMG20AQ9NP66 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMG20AQ9NP66 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms