Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 SPDYE8P-202ENST00000612377 668 ntBASIC17.31■□□□□ 0.36
LHX5Q9H2C1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 FOXO1B-201ENST00000504678 1527 ntBASIC17.31■□□□□ 0.36
LHX5Q9H2C1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 KRT18P28-201ENST00000453838 1332 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 MIR648-201ENST00000385046 94 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 CNN2P11-201ENST00000429351 262 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 SPCS2P4-201ENST00000436160 681 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AC079140.1-201ENST00000508039 487 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 KRT8P23-201ENST00000560090 1207 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AC027796.2-201ENST00000575326 344 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AC084121.4-201ENST00000641598 221 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 AF228730.8-201ENST00000642140 221 ntBASIC17.3■□□□□ 0.36
LHX5Q9H2C1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LHX5Q9H2C1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 AC142381.1-201ENST00000426099 345 ntBASIC17.29■□□□□ 0.36
LHX5Q9H2C1 METTL21AP1-201ENST00000438852 635 ntBASIC17.29■□□□□ 0.36
LHX5Q9H2C1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 SPTSSB-204ENST00000617024 1292 ntBASIC17.29■□□□□ 0.36
LHX5Q9H2C1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LHX5Q9H2C1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LHX5Q9H2C1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms