Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC233724.13-201ENST00000598383 410 ntBASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 RPL13P2-201ENST00000440687 659 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC018665.1-201ENST00000622927 1362 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC139713.2-201ENST00000641328 2723 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 REXO1L6P-201ENST00000603433 1515 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC004987.2-201ENST00000395959 1148 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AZGP1P1-201ENST00000411909 902 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AL162726.2-201ENST00000438986 1017 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC245100.5-201ENST00000452108 331 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 BNIP3P42-201ENST00000454982 569 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 BNIP3P29-201ENST00000598302 571 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AC011447.5-201ENST00000616168 564 ntBASIC21.04■□□□□ 0.96
PCDH11XQ9BZA7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 AL133373.2-201ENST00000623187 2828 ntBASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 MIR5189-201ENST00000577370 114 ntBASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH11XQ9BZA7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH11XQ9BZA7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11XQ9BZA7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11XQ9BZA7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH11XQ9BZA7 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11XQ9BZA7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH11XQ9BZA7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
PCDH11XQ9BZA7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.02■□□□□ 0.95
PCDH11XQ9BZA7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms