Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 AC245100.5-201ENST00000452108 331 ntBASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 AC093520.2-201ENST00000561830 333 ntBASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM62Q9BVG3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AC092171.3-201ENST00000610122 2651 ntBASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 SPDYE7P-202ENST00000420373 878 ntBASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 ALG1L8P-201ENST00000533887 760 ntBASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AC027612.4-201ENST00000605371 583 ntBASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AP001059.3-201ENST00000619053 235 ntBASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 ALOX12P2-203ENST00000570921 1945 ntBASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 PCDHA14-201ENST00000506751 2298 ntBASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM62Q9BVG3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM62Q9BVG3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 TSEN15P1-201ENST00000423257 515 ntBASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 RBPMS2P1-201ENST00000437762 623 ntBASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 AL512356.2-201ENST00000546955 174 ntBASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 RARRES2P9-201ENST00000565168 469 ntBASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM62Q9BVG3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms