Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 TSPY26P-202ENST00000565928 3884 ntBASIC14.82□□□□□ -0.04
PTP4A1Q93096 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 AC126177.1-201ENST00000547829 2218 ntBASIC14.81□□□□□ -0.04
PTP4A1Q93096 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 AP001350.2-201ENST00000625104 1094 ntBASIC14.81□□□□□ -0.04
PTP4A1Q93096 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 AC129492.6-201ENST00000611383 1305 ntBASIC14.81□□□□□ -0.04
PTP4A1Q93096 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTP4A1Q93096 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTP4A1Q93096 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 LAGE3P1-201ENST00000425356 484 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 OR7E14P-202ENST00000530490 1290 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 AL160237.2-201ENST00000556165 472 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 AC005412.3-201ENST00000580309 715 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 AC020765.3-201ENST00000613051 740 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 GGTLC5P-201ENST00000617623 998 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 AC107918.4-202ENST00000641623 219 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms