Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AC023141.5-201ENST00000458585 616 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 AP000842.3-202ENST00000569238 1080 ntBASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.71■□□□□ 0.27
SHROOM3Q8TF72 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SHROOM3Q8TF72 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.26
SHROOM3Q8TF72 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SHROOM3Q8TF72 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 AC069262.1-201ENST00000539058 672 ntBASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 MIR4469-201ENST00000583919 79 ntBASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 UXT-AS1-201ENST00000590504 1525 ntBASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM3Q8TF72 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 AC061975.2-201ENST00000581722 295 ntBASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 AC093028.1-201ENST00000622998 982 ntBASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms