Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 AC006449.6-201ENST00000612330 2296 ntBASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 NBN-203ENST00000409330 4523 ntTSL 5 BASIC9.03□□□□□ -0.96
SPTSSBQ8NFR3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SPTSSBQ8NFR3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 AL136116.3-201ENST00000402907 1138 ntBASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 MIR6084-201ENST00000622012 110 ntBASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
SPTSSBQ8NFR3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 AL118506.1-201ENST00000601296 3082 ntBASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 CICP16-201ENST00000502609 2813 ntBASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 GPAT2P1-201ENST00000444924 1672 ntBASIC9.01□□□□□ -0.97
SPTSSBQ8NFR3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms