Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HMCN2Q8NDA2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
HMCN2Q8NDA2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HMCN2Q8NDA2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC8.93□□□□□ -0.98
HMCN2Q8NDA2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC8.93□□□□□ -0.98
HMCN2Q8NDA2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
HMCN2Q8NDA2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HMCN2Q8NDA2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC015910.1-201ENST00000579400 975 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC000095.1-201ENST00000603208 874 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC093813.1-201ENST00000605066 256 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC244157.2-201ENST00000616239 1006 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC002472.4-201ENST00000641915 272 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AC093724.1-201ENST00000448659 1027 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 PPY2P-201ENST00000582808 702 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 AL353622.2-201ENST00000605846 425 ntBASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
HMCN2Q8NDA2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 MARK2P5-201ENST00000507649 634 ntBASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 AC007718.1-201ENST00000621078 280 ntBASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
HMCN2Q8NDA2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms