Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 AC006538.3-201ENST00000612495 578 ntBASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.52□□□□□ -0.09
ZIC4Q8N9L1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 RPS8P6-201ENST00000426177 609 ntBASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AP001160.2-201ENST00000596071 487 ntBASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AC027612.4-201ENST00000605371 583 ntBASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 AL596087.1-201ENST00000400979 1969 ntBASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.51□□□□□ -0.09
ZIC4Q8N9L1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 GPS2P2-201ENST00000430745 888 ntBASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 SNHG9-202ENST00000564014 471 ntBASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC4Q8N9L1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms