Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 MRPS18AP1-201ENST00000414458 589 ntBASIC16.67■□□□□ 0.26
PGBD3Q8N328 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 AC073389.1-201ENST00000595595 795 ntBASIC16.67■□□□□ 0.26
PGBD3Q8N328 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 AL662799.1-202ENST00000614205 422 ntBASIC16.67■□□□□ 0.26
PGBD3Q8N328 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PGBD3Q8N328 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 SPTSSB-204ENST00000617024 1292 ntBASIC16.66■□□□□ 0.26
PGBD3Q8N328 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PGBD3Q8N328 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.66■□□□□ 0.26
PGBD3Q8N328 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PGBD3Q8N328 RNA5SP410-201ENST00000516285 106 ntBASIC16.65■□□□□ 0.26
PGBD3Q8N328 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.65■□□□□ 0.26
PGBD3Q8N328 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms