Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SCML4Q8N228 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCML4Q8N228 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17■□□□□ 0.31
SCML4Q8N228 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17■□□□□ 0.31
SCML4Q8N228 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 FAM86GP-201ENST00000448322 971 ntBASIC17■□□□□ 0.31
SCML4Q8N228 KLF2P3-201ENST00000451977 1087 ntBASIC17■□□□□ 0.31
SCML4Q8N228 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
SCML4Q8N228 AC105021.1-202ENST00000570572 669 ntBASIC17■□□□□ 0.31
SCML4Q8N228 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17■□□□□ 0.31
SCML4Q8N228 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17■□□□□ 0.31
SCML4Q8N228 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17■□□□□ 0.31
SCML4Q8N228 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17■□□□□ 0.31
SCML4Q8N228 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17■□□□□ 0.31
SCML4Q8N228 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SCML4Q8N228 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17■□□□□ 0.31
SCML4Q8N228 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML4Q8N228 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17■□□□□ 0.31
SCML4Q8N228 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML4Q8N228 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SCML4Q8N228 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SCML4Q8N228 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SCML4Q8N228 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML4Q8N228 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.99■□□□□ 0.31
SCML4Q8N228 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.99■□□□□ 0.31
SCML4Q8N228 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML4Q8N228 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML4Q8N228 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.99■□□□□ 0.31
SCML4Q8N228 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.99■□□□□ 0.31
SCML4Q8N228 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML4Q8N228 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML4Q8N228 AL133215.2-201ENST00000609242 977 ntBASIC16.99■□□□□ 0.31
SCML4Q8N228 AC003101.2-201ENST00000612557 442 ntBASIC16.99■□□□□ 0.31
SCML4Q8N228 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML4Q8N228 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.99■□□□□ 0.31
SCML4Q8N228 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML4Q8N228 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCML4Q8N228 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML4Q8N228 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SCML4Q8N228 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.99■□□□□ 0.31
SCML4Q8N228 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCML4Q8N228 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SCML4Q8N228 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.98■□□□□ 0.31
SCML4Q8N228 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCML4Q8N228 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCML4Q8N228 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.98■□□□□ 0.31
SCML4Q8N228 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCML4Q8N228 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SCML4Q8N228 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCML4Q8N228 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SCML4Q8N228 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.98■□□□□ 0.31
SCML4Q8N228 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCML4Q8N228 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SCML4Q8N228 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCML4Q8N228 MIR648-201ENST00000385046 94 ntBASIC16.98■□□□□ 0.31
SCML4Q8N228 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.98■□□□□ 0.31
SCML4Q8N228 AL139010.1-201ENST00000454878 894 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms