Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 LINC01144-201ENST00000626198 1710 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AC012441.1-201ENST00000446669 685 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 KRT90P-201ENST00000549264 1064 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 MIR6787-201ENST00000616675 61 ntBASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL27A1Q8IZC6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 SOCS2P1-201ENST00000417727 557 ntBASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 AC136604.1-201ENST00000418535 575 ntBASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 DUX4L45-201ENST00000566406 1057 ntBASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 AC133539.2-201ENST00000604757 467 ntBASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 AL022328.1-201ENST00000610050 478 ntBASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL27A1Q8IZC6 KRT8P44-201ENST00000441609 1350 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 ACTG1P3-201ENST00000431775 1114 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 AC245100.3-201ENST00000441281 285 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 FAM8A2P-201ENST00000528813 1142 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 AP001094.4-201ENST00000579008 2176 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 SLED1-202ENST00000512051 380 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms