Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 AL391005.1-201ENST00000623953 2435 ntBASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 AC002347.1-201ENST00000569543 541 ntBASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 U82695.1-201ENST00000635752 1889 ntBASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 AL596087.1-201ENST00000400979 1969 ntBASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC65Q8IXS2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 PGAM5P1-201ENST00000518923 814 ntBASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC65Q8IXS2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 AL592424.1-201ENST00000563624 1536 ntBASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 AC093724.1-201ENST00000448659 1027 ntBASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 AC099522.2-201ENST00000607001 744 ntBASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC65Q8IXS2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC65Q8IXS2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC65Q8IXS2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC65Q8IXS2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC65Q8IXS2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms