Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 AC144831.1-201ENST00000573312 2656 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 TSPY19P-201ENST00000418461 509 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 TSPY18P-201ENST00000441642 509 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 AC091167.2-201ENST00000579581 588 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 MIR4492-201ENST00000581627 80 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 REXO1L3P-201ENST00000622202 1288 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 AL596087.1-201ENST00000400979 1969 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
RAPH1Q70E73 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 AC006504.4-201ENST00000592118 1568 ntBASIC16.6■□□□□ 0.25
RAPH1Q70E73 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAPH1Q70E73 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 ELK2BP-201ENST00000415014 1224 ntBASIC16.59■□□□□ 0.25
RAPH1Q70E73 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 AC006557.2-201ENST00000592985 1240 ntBASIC16.59■□□□□ 0.25
RAPH1Q70E73 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.59■□□□□ 0.25
RAPH1Q70E73 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 REXO1L6P-202ENST00000619970 1078 ntBASIC16.59■□□□□ 0.25
RAPH1Q70E73 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 GGT4P-201ENST00000623672 1708 ntBASIC16.59■□□□□ 0.25
RAPH1Q70E73 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAPH1Q70E73 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
RAPH1Q70E73 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAPH1Q70E73 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAPH1Q70E73 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.58■□□□□ 0.25
RAPH1Q70E73 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RAPH1Q70E73 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.58■□□□□ 0.25
RAPH1Q70E73 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.58■□□□□ 0.25
RAPH1Q70E73 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.58■□□□□ 0.25
RAPH1Q70E73 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.58■□□□□ 0.25
RAPH1Q70E73 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAPH1Q70E73 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAPH1Q70E73 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAPH1Q70E73 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RAPH1Q70E73 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.58■□□□□ 0.24
RAPH1Q70E73 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.58■□□□□ 0.24
RAPH1Q70E73 SLC25A6P2-201ENST00000497974 877 ntBASIC16.58■□□□□ 0.24
RAPH1Q70E73 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.58■□□□□ 0.24
RAPH1Q70E73 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAPH1Q70E73 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.58■□□□□ 0.24
RAPH1Q70E73 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAPH1Q70E73 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAPH1Q70E73 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAPH1Q70E73 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAPH1Q70E73 AC104640.1-201ENST00000562617 2109 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms