Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 AC006449.6-201ENST00000612330 2296 ntBASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AC040169.1-201ENST00000565382 521 ntBASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AL139011.1-202ENST00000642063 584 ntBASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 GGT3P-204ENST00000453783 1664 ntBASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AC002310.6-201ENST00000624451 1377 ntBASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.5■□□□□ 0.39
CCNI2Q6ZMN8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 Z83851.2-201ENST00000609564 659 ntBASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 FER1L4-210ENST00000615531 5998 ntBASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.49■□□□□ 0.39
CCNI2Q6ZMN8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 AC125634.1-201ENST00000438758 1403 ntBASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNI2Q6ZMN8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCNI2Q6ZMN8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCNI2Q6ZMN8 AC112504.1-201ENST00000623415 1841 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms