Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 AC010327.4-202ENST00000591484 748 ntBASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN20Q4JDL3 LINC02199-201ENST00000506655 2702 ntBASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 GPX1P2-201ENST00000429271 606 ntBASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 RN7SL589P-201ENST00000481268 310 ntBASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 FAM86C2P-203ENST00000528684 1004 ntBASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 AC026120.1-201ENST00000611536 926 ntBASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN20Q4JDL3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PTPN20Q4JDL3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AL589702.1-201ENST00000641229 1509 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 RPSAP43-201ENST00000402237 625 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 SPCS2P4-201ENST00000436160 681 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AC079140.1-201ENST00000508039 487 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 YBX1P5-201ENST00000509441 847 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AC005829.1-201ENST00000570002 483 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AC027307.2-201ENST00000591252 911 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms