Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC23.19■■□□□ 1.3
SPHKAPQ2M3C7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 CROCCP4-201ENST00000457096 498 ntBASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 RN7SL399P-201ENST00000471648 279 ntBASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 MIR4259-201ENST00000584466 101 ntBASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 ME2P1-201ENST00000426028 1970 ntBASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
SPHKAPQ2M3C7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 ZBTB45P2-201ENST00000452245 1531 ntBASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 GNRHR2-203ENST00000581100 1187 ntBASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPHKAPQ2M3C7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 AC022210.1-201ENST00000449856 793 ntBASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 AP005482.1-201ENST00000563722 1273 ntBASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHKAPQ2M3C7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPHKAPQ2M3C7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC23.15■■□□□ 1.3
SPHKAPQ2M3C7 AC005052.1-201ENST00000625181 2492 ntBASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms