Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH17Q12864 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDH17Q12864 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDH17Q12864 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH17Q12864 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH17Q12864 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.62■□□□□ 0.25
CDH17Q12864 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDH17Q12864 AC092474.2-201ENST00000424288 719 ntBASIC16.62■□□□□ 0.25
CDH17Q12864 AC007967.2-201ENST00000432613 625 ntBASIC16.62■□□□□ 0.25
CDH17Q12864 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.62■□□□□ 0.25
CDH17Q12864 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 KRT19P2-202ENST00000557173 1012 ntBASIC16.62■□□□□ 0.25
CDH17Q12864 AC018845.2-201ENST00000568326 409 ntBASIC16.62■□□□□ 0.25
CDH17Q12864 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH17Q12864 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH17Q12864 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH17Q12864 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH17Q12864 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH17Q12864 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDH17Q12864 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH17Q12864 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDH17Q12864 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 AC024909.3-201ENST00000611513 2257 ntBASIC16.61■□□□□ 0.25
CDH17Q12864 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDH17Q12864 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH17Q12864 AL590627.1-203ENST00000421194 1026 ntBASIC16.61■□□□□ 0.25
CDH17Q12864 KRT18P34-201ENST00000488218 1270 ntBASIC16.61■□□□□ 0.25
CDH17Q12864 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH17Q12864 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
CDH17Q12864 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH17Q12864 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.61■□□□□ 0.25
CDH17Q12864 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDH17Q12864 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH17Q12864 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 AL121894.2-201ENST00000602977 491 ntBASIC16.61■□□□□ 0.25
CDH17Q12864 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH17Q12864 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH17Q12864 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDH17Q12864 AL603832.2-201ENST00000566195 2125 ntBASIC16.61■□□□□ 0.25
CDH17Q12864 ZNF259P1-201ENST00000407656 1365 ntBASIC16.61■□□□□ 0.25
CDH17Q12864 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH17Q12864 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH17Q12864 AC008894.3-201ENST00000624324 3103 ntBASIC16.61■□□□□ 0.25
CDH17Q12864 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms