Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 AL078644.1-201ENST00000609881 752 ntBASIC15.88■□□□□ 0.13
PCDH1Q08174 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH1Q08174 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH1Q08174 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 AC022188.1-201ENST00000620960 1664 ntBASIC15.88■□□□□ 0.13
PCDH1Q08174 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 U82695.1-201ENST00000635752 1889 ntBASIC15.88■□□□□ 0.13
PCDH1Q08174 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 BCAR1-209ENST00000546196 1340 ntBASIC15.88■□□□□ 0.13
PCDH1Q08174 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH1Q08174 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH1Q08174 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH1Q08174 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH1Q08174 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH1Q08174 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH1Q08174 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 AC074386.1-202ENST00000463561 864 ntBASIC15.87■□□□□ 0.13
PCDH1Q08174 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 AP002472.1-201ENST00000577490 586 ntBASIC15.87■□□□□ 0.13
PCDH1Q08174 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH1Q08174 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 AC027601.4-201ENST00000611259 610 ntBASIC15.87■□□□□ 0.13
PCDH1Q08174 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 AL662844.4-201ENST00000606367 2838 ntBASIC15.87■□□□□ 0.13
PCDH1Q08174 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PCDH1Q08174 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH1Q08174 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH1Q08174 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDH1Q08174 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDH1Q08174 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH1Q08174 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.86■□□□□ 0.13
PCDH1Q08174 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH1Q08174 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDH1Q08174 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
PCDH1Q08174 KRT18P34-201ENST00000488218 1270 ntBASIC15.86■□□□□ 0.13
PCDH1Q08174 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH1Q08174 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH1Q08174 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH1Q08174 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDH1Q08174 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH1Q08174 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms