Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
HSPG2P98160 PRSS30P-206ENST00000641773 873 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 NME9-203ENST00000383180 2133 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 AL596276.2-201ENST00000447525 331 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 AC022137.2-201ENST00000503482 481 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 RN7SL48P-201ENST00000579283 293 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
HSPG2P98160 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC9.94□□□□□ -0.82
HSPG2P98160 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
HSPG2P98160 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 KRT18P64-201ENST00000434946 1219 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 HSPB1P2-201ENST00000448722 546 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.82
HSPG2P98160 AC087289.5-201ENST00000586076 3175 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 AL590640.2-201ENST00000457038 527 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 AC023310.1-201ENST00000554836 735 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 AC015910.1-201ENST00000579400 975 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 AL138709.1-201ENST00000614840 1693 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC9.93□□□□□ -0.82
HSPG2P98160 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC9.93□□□□□ -0.82
HSPG2P98160 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 IDS-203ENST00000428056 1213 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 SUPT4H1P2-201ENST00000501248 353 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 AC024681.1-201ENST00000521917 487 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC9.93□□□□□ -0.82
HSPG2P98160 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC9.93□□□□□ -0.82
HSPG2P98160 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
HSPG2P98160 AC008132.1-202ENST00000342005 1389 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
HSPG2P98160 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC9.93□□□□□ -0.82
HSPG2P98160 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC9.93□□□□□ -0.82
HSPG2P98160 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 AZGP1P1-201ENST00000411909 902 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 AC135983.4-201ENST00000564116 1262 ntBASIC9.93□□□□□ -0.82
HSPG2P98160 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC9.93□□□□□ -0.82
HSPG2P98160 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
HSPG2P98160 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC9.93□□□□□ -0.82
HSPG2P98160 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
HSPG2P98160 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms