Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NEK3P51956 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.98■□□□□ 0.31
NEK3P51956 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 AC024909.3-201ENST00000611513 2257 ntBASIC16.98■□□□□ 0.31
NEK3P51956 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NEK3P51956 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NEK3P51956 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 AC002056.1-201ENST00000395613 760 ntBASIC16.98■□□□□ 0.31
NEK3P51956 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.98■□□□□ 0.31
NEK3P51956 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 AC091167.2-201ENST00000579581 588 ntBASIC16.98■□□□□ 0.31
NEK3P51956 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.98■□□□□ 0.31
NEK3P51956 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NEK3P51956 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 AL596442.2-201ENST00000610240 980 ntBASIC16.98■□□□□ 0.31
NEK3P51956 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
NEK3P51956 AC092902.6-201ENST00000641783 218 ntBASIC16.98■□□□□ 0.31
NEK3P51956 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.98■□□□□ 0.31
NEK3P51956 ME2P1-201ENST00000426028 1970 ntBASIC16.98■□□□□ 0.31
NEK3P51956 AL021920.2-201ENST00000624828 1351 ntBASIC16.98■□□□□ 0.31
NEK3P51956 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NEK3P51956 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.98■□□□□ 0.31
NEK3P51956 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NEK3P51956 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
NEK3P51956 AC012569.1-201ENST00000591191 1524 ntBASIC16.97■□□□□ 0.31
NEK3P51956 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.97■□□□□ 0.31
NEK3P51956 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 HCG4-201ENST00000418983 998 ntBASIC16.97■□□□□ 0.31
NEK3P51956 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 AC140658.5-201ENST00000438532 169 ntBASIC16.97■□□□□ 0.31
NEK3P51956 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.97■□□□□ 0.31
NEK3P51956 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.97■□□□□ 0.31
NEK3P51956 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NEK3P51956 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
NEK3P51956 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NEK3P51956 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.96■□□□□ 0.31
NEK3P51956 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NEK3P51956 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.96■□□□□ 0.31
NEK3P51956 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.96■□□□□ 0.31
NEK3P51956 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NEK3P51956 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms