Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGCLP35914 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.35■□□□□ 0.21
HMGCLP35914 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCLP35914 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGCLP35914 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCLP35914 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCLP35914 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCLP35914 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCLP35914 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.34■□□□□ 0.21
HMGCLP35914 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCLP35914 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.34■□□□□ 0.21
HMGCLP35914 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.34■□□□□ 0.21
HMGCLP35914 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HMGCLP35914 AL365330.1-201ENST00000607459 531 ntBASIC16.34■□□□□ 0.21
HMGCLP35914 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
HMGCLP35914 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCLP35914 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HMGCLP35914 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCLP35914 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCLP35914 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HMGCLP35914 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCLP35914 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCLP35914 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.33■□□□□ 0.21
HMGCLP35914 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HMGCLP35914 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGCLP35914 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGCLP35914 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGCLP35914 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCLP35914 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCLP35914 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCLP35914 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
HMGCLP35914 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 AL627223.1-201ENST00000416693 442 ntBASIC16.33■□□□□ 0.2
HMGCLP35914 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 AC005237.2-201ENST00000434368 219 ntBASIC16.33■□□□□ 0.2
HMGCLP35914 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HMGCLP35914 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.33■□□□□ 0.2
HMGCLP35914 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
HMGCLP35914 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCLP35914 UXT-AS1-201ENST00000590504 1525 ntBASIC16.33■□□□□ 0.2
HMGCLP35914 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HMGCLP35914 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 AL596087.1-201ENST00000400979 1969 ntBASIC16.33■□□□□ 0.2
HMGCLP35914 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCLP35914 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCLP35914 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HMGCLP35914 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCLP35914 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms