Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A4P31645 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AC092580.3-201ENST00000430932 139 ntBASIC16.81■□□□□ 0.28
SLC6A4P31645 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 POU5F1P6-201ENST00000466990 990 ntBASIC16.81■□□□□ 0.28
SLC6A4P31645 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC6A4P31645 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 U82695.1-201ENST00000635752 1889 ntBASIC16.81■□□□□ 0.28
SLC6A4P31645 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SLC6A4P31645 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A4P31645 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A4P31645 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A4P31645 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC6A4P31645 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A4P31645 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 AL353705.2-201ENST00000428243 662 ntBASIC16.8■□□□□ 0.28
SLC6A4P31645 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC6A4P31645 AC097493.3-201ENST00000509725 367 ntBASIC16.8■□□□□ 0.28
SLC6A4P31645 AC069120.2-201ENST00000524091 540 ntBASIC16.8■□□□□ 0.28
SLC6A4P31645 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 AC079328.2-201ENST00000561241 3354 ntBASIC16.8■□□□□ 0.28
SLC6A4P31645 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A4P31645 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A4P31645 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC6A4P31645 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A4P31645 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC6A4P31645 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A4P31645 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A4P31645 AC105021.1-202ENST00000570572 669 ntBASIC16.79■□□□□ 0.28
SLC6A4P31645 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A4P31645 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC6A4P31645 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A4P31645 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms