Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA11P31270 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA11P31270 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA11P31270 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HOXA11P31270 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA11P31270 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 BTBD7P1-201ENST00000447253 1453 ntBASIC17.63■□□□□ 0.41
HOXA11P31270 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA11P31270 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXA11P31270 REXO1L8P-201ENST00000604378 1897 ntBASIC17.63■□□□□ 0.41
HOXA11P31270 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA11P31270 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXA11P31270 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXA11P31270 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA11P31270 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA11P31270 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA11P31270 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA11P31270 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA11P31270 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA11P31270 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA11P31270 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HOXA11P31270 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
HOXA11P31270 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA11P31270 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA11P31270 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 CYP4F24P-201ENST00000586049 1580 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA11P31270 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA11P31270 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA11P31270 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 HIST3H2BA-201ENST00000436555 524 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXA11P31270 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXA11P31270 AC135586.1-201ENST00000539323 574 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA11P31270 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXA11P31270 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 AC004790.1-201ENST00000612686 536 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.62■□□□□ 0.41
HOXA11P31270 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXA11P31270 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA11P31270 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXA11P31270 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXA11P31270 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA11P31270 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA11P31270 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA11P31270 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA11P31270 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXA11P31270 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA11P31270 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA11P31270 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA11P31270 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA11P31270 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA11P31270 SERBP1P3-201ENST00000459980 809 ntBASIC17.61■□□□□ 0.41
HOXA11P31270 AP005018.1-201ENST00000525475 301 ntBASIC17.61■□□□□ 0.41
HOXA11P31270 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA11P31270 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA11P31270 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.61■□□□□ 0.41
HOXA11P31270 AL662799.1-202ENST00000614205 422 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms