Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL138918.1-201ENST00000568306 659 ntBASIC17.26■□□□□ 0.35
MMP8P22894 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.26■□□□□ 0.35
MMP8P22894 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.26■□□□□ 0.35
MMP8P22894 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.26■□□□□ 0.35
MMP8P22894 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
MMP8P22894 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
MMP8P22894 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP8P22894 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 AC010491.1-201ENST00000563101 2797 ntBASIC17.26■□□□□ 0.35
MMP8P22894 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.26■□□□□ 0.35
MMP8P22894 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MMP8P22894 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.25■□□□□ 0.35
MMP8P22894 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 AL671277.1-201ENST00000429656 993 ntBASIC17.25■□□□□ 0.35
MMP8P22894 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
MMP8P22894 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP8P22894 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
MMP8P22894 AC007950.2-201ENST00000615045 2347 ntBASIC17.25■□□□□ 0.35
MMP8P22894 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.25■□□□□ 0.35
MMP8P22894 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
MMP8P22894 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP8P22894 CDC14C-201ENST00000428251 1719 ntBASIC17.24■□□□□ 0.35
MMP8P22894 PMS2P7-201ENST00000506558 1336 ntBASIC17.24■□□□□ 0.35
MMP8P22894 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
MMP8P22894 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP8P22894 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MMP8P22894 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.24■□□□□ 0.35
MMP8P22894 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
MMP8P22894 FAM86C2P-203ENST00000528684 1004 ntBASIC17.24■□□□□ 0.35
MMP8P22894 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
MMP8P22894 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.24■□□□□ 0.35
MMP8P22894 AL135744.1-201ENST00000565098 629 ntBASIC17.24■□□□□ 0.35
MMP8P22894 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.24■□□□□ 0.35
MMP8P22894 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP8P22894 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.24■□□□□ 0.35
MMP8P22894 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 C20orf181-201ENST00000623918 480 ntBASIC17.24■□□□□ 0.35
MMP8P22894 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
MMP8P22894 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MMP8P22894 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP8P22894 AC069224.1-201ENST00000566372 1715 ntBASIC17.24■□□□□ 0.35
MMP8P22894 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP8P22894 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms