Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.74■□□□□ 0.27
NFKB1P19838 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.74■□□□□ 0.27
NFKB1P19838 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.74■□□□□ 0.27
NFKB1P19838 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.74■□□□□ 0.27
NFKB1P19838 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.74■□□□□ 0.27
NFKB1P19838 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.74■□□□□ 0.27
NFKB1P19838 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.74■□□□□ 0.27
NFKB1P19838 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.74■□□□□ 0.27
NFKB1P19838 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.74■□□□□ 0.27
NFKB1P19838 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
NFKB1P19838 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NFKB1P19838 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NFKB1P19838 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.73■□□□□ 0.27
NFKB1P19838 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.73■□□□□ 0.27
NFKB1P19838 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NFKB1P19838 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
NFKB1P19838 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.73■□□□□ 0.27
NFKB1P19838 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.73■□□□□ 0.27
NFKB1P19838 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 KRT18P34-201ENST00000488218 1270 ntBASIC16.73■□□□□ 0.27
NFKB1P19838 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.73■□□□□ 0.27
NFKB1P19838 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.73■□□□□ 0.27
NFKB1P19838 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NFKB1P19838 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
NFKB1P19838 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.73■□□□□ 0.27
NFKB1P19838 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NFKB1P19838 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.73■□□□□ 0.27
NFKB1P19838 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.73■□□□□ 0.27
NFKB1P19838 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.73■□□□□ 0.27
NFKB1P19838 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.73■□□□□ 0.27
NFKB1P19838 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NFKB1P19838 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NFKB1P19838 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NFKB1P19838 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.72■□□□□ 0.27
NFKB1P19838 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.72■□□□□ 0.27
NFKB1P19838 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NFKB1P19838 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.72■□□□□ 0.27
NFKB1P19838 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NFKB1P19838 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 MIR574-201ENST00000385209 96 ntBASIC16.72■□□□□ 0.27
NFKB1P19838 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.72■□□□□ 0.27
NFKB1P19838 POLD2P1-201ENST00000511220 997 ntBASIC16.72■□□□□ 0.27
NFKB1P19838 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.72■□□□□ 0.27
NFKB1P19838 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
NFKB1P19838 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NFKB1P19838 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NFKB1P19838 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.72■□□□□ 0.27
NFKB1P19838 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.72■□□□□ 0.27
NFKB1P19838 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NFKB1P19838 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NFKB1P19838 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NFKB1P19838 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms