Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.54■□□□□ 0.24
SRPRAP08240 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.53■□□□□ 0.24
SRPRAP08240 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.53■□□□□ 0.24
SRPRAP08240 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
SRPRAP08240 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SRPRAP08240 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
SRPRAP08240 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.53■□□□□ 0.24
SRPRAP08240 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.53■□□□□ 0.24
SRPRAP08240 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.53■□□□□ 0.24
SRPRAP08240 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.53■□□□□ 0.24
SRPRAP08240 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.53■□□□□ 0.24
SRPRAP08240 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.53■□□□□ 0.24
SRPRAP08240 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.53■□□□□ 0.24
SRPRAP08240 AL079307.3-201ENST00000556114 283 ntBASIC16.53■□□□□ 0.24
SRPRAP08240 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.53■□□□□ 0.24
SRPRAP08240 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.53■□□□□ 0.24
SRPRAP08240 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.53■□□□□ 0.24
SRPRAP08240 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.53■□□□□ 0.24
SRPRAP08240 TEX28P1-201ENST00000613479 1221 ntBASIC16.53■□□□□ 0.24
SRPRAP08240 TEX28P2-201ENST00000617764 1221 ntBASIC16.53■□□□□ 0.24
SRPRAP08240 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SRPRAP08240 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.53■□□□□ 0.24
SRPRAP08240 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
SRPRAP08240 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SRPRAP08240 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SRPRAP08240 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRPRAP08240 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.52■□□□□ 0.24
SRPRAP08240 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SRPRAP08240 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SRPRAP08240 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SRPRAP08240 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRPRAP08240 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.52■□□□□ 0.24
SRPRAP08240 AC087499.5-201ENST00000452760 1342 ntBASIC16.52■□□□□ 0.24
SRPRAP08240 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRPRAP08240 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.52■□□□□ 0.24
SRPRAP08240 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.52■□□□□ 0.24
SRPRAP08240 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.52■□□□□ 0.24
SRPRAP08240 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.52■□□□□ 0.24
SRPRAP08240 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 RPL37AP1-201ENST00000412502 279 ntBASIC16.52■□□□□ 0.24
SRPRAP08240 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.52■□□□□ 0.24
SRPRAP08240 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.52■□□□□ 0.24
SRPRAP08240 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRPRAP08240 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.52■□□□□ 0.24
SRPRAP08240 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.52■□□□□ 0.23
SRPRAP08240 PCDHA12-202ENST00000613593 2588 ntBASIC16.52■□□□□ 0.23
SRPRAP08240 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.52■□□□□ 0.23
SRPRAP08240 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRPRAP08240 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
SRPRAP08240 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SRPRAP08240 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRPRAP08240 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.52■□□□□ 0.23
SRPRAP08240 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRPRAP08240 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRPRAP08240 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRPRAP08240 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SRPRAP08240 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRPRAP08240 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SRPRAP08240 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.51■□□□□ 0.23
SRPRAP08240 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 AC022211.2-201ENST00000585075 2527 ntBASIC16.51■□□□□ 0.23
SRPRAP08240 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRPRAP08240 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
SRPRAP08240 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.51■□□□□ 0.23
SRPRAP08240 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.51■□□□□ 0.23
SRPRAP08240 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRPRAP08240 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRPRAP08240 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms