Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.48□□□□□ -0.25
SSSCA1O60232 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.48□□□□□ -0.25
SSSCA1O60232 AC011467.2-201ENST00000598425 242 ntBASIC13.48□□□□□ -0.25
SSSCA1O60232 HYMAI.1-201ENST00000620949 238 ntBASIC13.48□□□□□ -0.25
SSSCA1O60232 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SSSCA1O60232 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.48□□□□□ -0.25
SSSCA1O60232 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SSSCA1O60232 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
SSSCA1O60232 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSSCA1O60232 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
SSSCA1O60232 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.47□□□□□ -0.25
SSSCA1O60232 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 VENTXP7-201ENST00000475503 772 ntBASIC13.47□□□□□ -0.25
SSSCA1O60232 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.47□□□□□ -0.25
SSSCA1O60232 AC090616.6-201ENST00000582640 721 ntBASIC13.47□□□□□ -0.25
SSSCA1O60232 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 SNX33P1-201ENST00000592116 1762 ntBASIC13.47□□□□□ -0.25
SSSCA1O60232 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.47□□□□□ -0.25
SSSCA1O60232 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSSCA1O60232 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SSSCA1O60232 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SSSCA1O60232 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.46□□□□□ -0.25
SSSCA1O60232 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SSSCA1O60232 PCGF3-213ENST00000620529 1899 ntBASIC13.46□□□□□ -0.25
SSSCA1O60232 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
SSSCA1O60232 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.46□□□□□ -0.25
SSSCA1O60232 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.46□□□□□ -0.25
SSSCA1O60232 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SSSCA1O60232 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
SSSCA1O60232 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.46□□□□□ -0.25
SSSCA1O60232 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms