Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SLC28A2O43868 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC28A2O43868 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
SLC28A2O43868 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC28A2O43868 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SLC28A2O43868 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC28A2O43868 LINC00982-205ENST00000420957 435 ntBASIC15.9■□□□□ 0.14
SLC28A2O43868 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC28A2O43868 TIMM8BP1-201ENST00000452384 211 ntBASIC15.9■□□□□ 0.14
SLC28A2O43868 UGT1A2P-201ENST00000454886 866 ntBASIC15.9■□□□□ 0.14
SLC28A2O43868 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC28A2O43868 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC28A2O43868 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
SLC28A2O43868 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SLC28A2O43868 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC28A2O43868 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC28A2O43868 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC28A2O43868 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC28A2O43868 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 AL139384.1-201ENST00000612143 3047 ntBASIC15.89■□□□□ 0.13
SLC28A2O43868 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 AL627223.1-201ENST00000416693 442 ntBASIC15.89■□□□□ 0.13
SLC28A2O43868 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC28A2O43868 ATP5G2P4-201ENST00000442175 420 ntBASIC15.89■□□□□ 0.13
SLC28A2O43868 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC28A2O43868 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC28A2O43868 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC28A2O43868 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A2O43868 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC28A2O43868 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC28A2O43868 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC28A2O43868 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A2O43868 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A2O43868 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A2O43868 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.88■□□□□ 0.13
SLC28A2O43868 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A2O43868 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A2O43868 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A2O43868 AC005237.2-201ENST00000434368 219 ntBASIC15.88■□□□□ 0.13
SLC28A2O43868 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A2O43868 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms