Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM88BA6NKF7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 AC090164.3-201ENST00000610780 2143 ntBASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 AC022137.2-201ENST00000503482 481 ntBASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 AC078819.1-201ENST00000547454 765 ntBASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 AC012085.1-201ENST00000548270 765 ntBASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 AL451050.2-201ENST00000606967 682 ntBASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 AL096828.3-201ENST00000615354 462 ntBASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TMEM88BA6NKF7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 MIR769-201ENST00000390225 118 ntBASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 FAM197Y7-201ENST00000432892 766 ntBASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 AP003419.4-201ENST00000616071 517 ntBASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 AC138951.2-201ENST00000623455 1161 ntBASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 HLA-C-210ENST00000640219 976 ntBASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 AL138781.2-201ENST00000617896 1843 ntBASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TMEM88BA6NKF7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 ACKR1-201ENST00000368121 1240 ntBASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 CYP46A4P-201ENST00000414953 267 ntBASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms