Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 SAPCD2P3-201ENST00000455031 850 ntBASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 AC021087.4-201ENST00000563761 564 ntBASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PRELID1P1-202ENST00000567272 903 ntBASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 AC107918.4-202ENST00000641623 219 ntBASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00959A0A1B0GUT2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 MIR600HG-201ENST00000449175 5984 ntBASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00959A0A1B0GUT2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00959A0A1B0GUT2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms