Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB1Q9Y5G3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGB1Q9Y5G3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PCDHGB1Q9Y5G3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGB1Q9Y5G3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHGB1Q9Y5G3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGB1Q9Y5G3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGB1Q9Y5G3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGB1Q9Y5G3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB1Q9Y5G3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB1Q9Y5G3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB1Q9Y5G3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB1Q9Y5G3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB1Q9Y5G3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB1Q9Y5G3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB1Q9Y5G3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB1Q9Y5G3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB1Q9Y5G3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PCDHGB1Q9Y5G3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB1Q9Y5G3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB1Q9Y5G3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB1Q9Y5G3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB1Q9Y5G3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
PCDHGB1Q9Y5G3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHGB1Q9Y5G3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PCDHGB1Q9Y5G3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
PCDHGB1Q9Y5G3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB1Q9Y5G3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB1Q9Y5G3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB1Q9Y5G3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB1Q9Y5G3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB1Q9Y5G3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB1Q9Y5G3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB1Q9Y5G3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 DUX4L29-201ENST00000425409 679 ntBASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 AC021231.2-201ENST00000594613 730 ntBASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB1Q9Y5G3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGB1Q9Y5G3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB1Q9Y5G3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms