Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSL2Q9HCI7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSL2Q9HCI7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.34■□□□□ 0.85
MSL2Q9HCI7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSL2Q9HCI7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSL2Q9HCI7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.34■□□□□ 0.85
MSL2Q9HCI7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSL2Q9HCI7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSL2Q9HCI7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSL2Q9HCI7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSL2Q9HCI7 AC097639.1-201ENST00000565519 1891 ntBASIC20.33■□□□□ 0.85
MSL2Q9HCI7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.33■□□□□ 0.85
MSL2Q9HCI7 AC010980.1-201ENST00000587192 1142 ntBASIC20.33■□□□□ 0.85
MSL2Q9HCI7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.33■□□□□ 0.84
MSL2Q9HCI7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
MSL2Q9HCI7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSL2Q9HCI7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MSL2Q9HCI7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSL2Q9HCI7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
MSL2Q9HCI7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSL2Q9HCI7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSL2Q9HCI7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSL2Q9HCI7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSL2Q9HCI7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 AC074183.2-201ENST00000623112 922 ntBASIC20.28■□□□□ 0.84
MSL2Q9HCI7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
MSL2Q9HCI7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSL2Q9HCI7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MSL2Q9HCI7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSL2Q9HCI7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSL2Q9HCI7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSL2Q9HCI7 LONRF2P2-201ENST00000439212 571 ntBASIC20.27■□□□□ 0.84
MSL2Q9HCI7 PVT1_1.1-201ENST00000615125 194 ntBASIC20.27■□□□□ 0.84
MSL2Q9HCI7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSL2Q9HCI7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MSL2Q9HCI7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MSL2Q9HCI7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSL2Q9HCI7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.25■□□□□ 0.83
MSL2Q9HCI7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
MSL2Q9HCI7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 KRT8P33-201ENST00000508125 1423 ntBASIC20.24■□□□□ 0.83
MSL2Q9HCI7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSL2Q9HCI7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSL2Q9HCI7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSL2Q9HCI7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSL2Q9HCI7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms