Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SND1-IT1Q9HBX3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SND1-IT1Q9HBX3 AC079834.2-201ENST00000609776 1949 ntBASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 AC096887.2-201ENST00000623443 1957 ntBASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SND1-IT1Q9HBX3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 AC021231.2-201ENST00000594613 730 ntBASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SND1-IT1Q9HBX3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SND1-IT1Q9HBX3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 LINC00543-201ENST00000567234 1845 ntBASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SND1-IT1Q9HBX3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 DUX4L29-201ENST00000425409 679 ntBASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SND1-IT1Q9HBX3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.71■□□□□ 0.11
SND1-IT1Q9HBX3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SND1-IT1Q9HBX3 AL162393.1-201ENST00000437852 946 ntBASIC15.71■□□□□ 0.11
SND1-IT1Q9HBX3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
SND1-IT1Q9HBX3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.7■□□□□ 0.1
SND1-IT1Q9HBX3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SND1-IT1Q9HBX3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC15.7■□□□□ 0.1
SND1-IT1Q9HBX3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SND1-IT1Q9HBX3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SND1-IT1Q9HBX3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SND1-IT1Q9HBX3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SND1-IT1Q9HBX3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms