Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PACS2Q86VP3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PACS2Q86VP3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PACS2Q86VP3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.68■■□□□ 1.38
PACS2Q86VP3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.68■■□□□ 1.38
PACS2Q86VP3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PACS2Q86VP3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PACS2Q86VP3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PACS2Q86VP3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.68■■□□□ 1.38
PACS2Q86VP3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.68■■□□□ 1.38
PACS2Q86VP3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PACS2Q86VP3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.67■■□□□ 1.38
PACS2Q86VP3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PACS2Q86VP3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PACS2Q86VP3 LINC00273-201ENST00000539813 1452 ntBASIC23.67■■□□□ 1.38
PACS2Q86VP3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
PACS2Q86VP3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PACS2Q86VP3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.66■■□□□ 1.38
PACS2Q86VP3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PACS2Q86VP3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PACS2Q86VP3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PACS2Q86VP3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PACS2Q86VP3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
PACS2Q86VP3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PACS2Q86VP3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PACS2Q86VP3 AP002414.2-202ENST00000590929 1450 ntBASIC23.65■■□□□ 1.38
PACS2Q86VP3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.65■■□□□ 1.38
PACS2Q86VP3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PACS2Q86VP3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PACS2Q86VP3 AL121603.2-201ENST00000557373 2117 ntBASIC23.65■■□□□ 1.38
PACS2Q86VP3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PACS2Q86VP3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PACS2Q86VP3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PACS2Q86VP3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PACS2Q86VP3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
PACS2Q86VP3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PACS2Q86VP3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.64■■□□□ 1.37
PACS2Q86VP3 WHAMMP3-201ENST00000611636 1609 ntBASIC23.63■■□□□ 1.37
PACS2Q86VP3 DUX4L11-201ENST00000611504 1267 ntBASIC23.63■■□□□ 1.37
PACS2Q86VP3 DUX4L12-201ENST00000614593 1267 ntBASIC23.63■■□□□ 1.37
PACS2Q86VP3 DUX4L14-201ENST00000621227 1267 ntBASIC23.63■■□□□ 1.37
PACS2Q86VP3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PACS2Q86VP3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PACS2Q86VP3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.62■■□□□ 1.37
PACS2Q86VP3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PACS2Q86VP3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.62■■□□□ 1.37
PACS2Q86VP3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PACS2Q86VP3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PACS2Q86VP3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.61■■□□□ 1.37
PACS2Q86VP3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PACS2Q86VP3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PACS2Q86VP3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.6■■□□□ 1.37
PACS2Q86VP3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.6■■□□□ 1.37
PACS2Q86VP3 ABCB10P4-201ENST00000566803 2184 ntBASIC23.6■■□□□ 1.37
PACS2Q86VP3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PACS2Q86VP3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.6■■□□□ 1.37
PACS2Q86VP3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PACS2Q86VP3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PACS2Q86VP3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PACS2Q86VP3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PACS2Q86VP3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PACS2Q86VP3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.59■■□□□ 1.37
PACS2Q86VP3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PACS2Q86VP3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.59■■□□□ 1.37
PACS2Q86VP3 AC096887.2-201ENST00000623443 1957 ntBASIC23.59■■□□□ 1.37
PACS2Q86VP3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PACS2Q86VP3 AP004609.3-201ENST00000610705 1884 ntBASIC23.58■■□□□ 1.37
PACS2Q86VP3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.58■■□□□ 1.37
PACS2Q86VP3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PACS2Q86VP3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PACS2Q86VP3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PACS2Q86VP3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.57■■□□□ 1.36
PACS2Q86VP3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.57■■□□□ 1.36
PACS2Q86VP3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PACS2Q86VP3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.57■■□□□ 1.36
PACS2Q86VP3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
PACS2Q86VP3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PACS2Q86VP3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PACS2Q86VP3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
PACS2Q86VP3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PACS2Q86VP3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PACS2Q86VP3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.56■■□□□ 1.36
PACS2Q86VP3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.56■■□□□ 1.36
PACS2Q86VP3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PACS2Q86VP3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
PACS2Q86VP3 AC007375.3-201ENST00000600936 2314 ntBASIC23.55■■□□□ 1.36
PACS2Q86VP3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.55■■□□□ 1.36
PACS2Q86VP3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.55■■□□□ 1.36
PACS2Q86VP3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PACS2Q86VP3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.55■■□□□ 1.36
PACS2Q86VP3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PACS2Q86VP3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PACS2Q86VP3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PACS2Q86VP3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PACS2Q86VP3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.54■■□□□ 1.36
PACS2Q86VP3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PACS2Q86VP3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PACS2Q86VP3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PACS2Q86VP3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PACS2Q86VP3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms