Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 KIF2A-208ENST00000512006 392 ntTSL 59.9□□□□□ -0.823e-6■■■■■ 27
LSM11P83369 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.853e-6■■■■■ 27
LSM11P83369 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.863e-6■■■■■ 27
LSM11P83369 RSRC2-214ENST00000527796 3156 ntTSL 59.64□□□□□ -0.877e-22■■■■■ 27
LSM11P83369 SLC10A7-207ENST00000511315 1013 ntTSL 1 (best)9.53□□□□□ -0.883e-6■■■■■ 27
LSM11P83369 PITPNC1-204ENST00000581322 1124 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.93e-6■■■■■ 27
LSM11P83369 PEAK1-207ENST00000565820 558 ntTSL 49.07□□□□□ -0.963e-6■■■■■ 27
LSM11P83369 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC8.95□□□□□ -0.983e-6■■■■■ 27
LSM11P83369 RSRC2-215ENST00000528263 792 ntTSL 38.93□□□□□ -0.987e-22■■■■■ 27
LSM11P83369 ELOVL1-205ENST00000468865 797 ntTSL 38.83□□□□□ -12e-11■■■■■ 27
LSM11P83369 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.83□□□□□ -13e-6■■■■■ 27
LSM11P83369 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC8.44□□□□□ -1.063e-6■■■■■ 27
LSM11P83369 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.123e-6■■■■■ 27
LSM11P83369 AL033504.1-202ENST00000432506 406 ntTSL 28.01□□□□□ -1.133e-6■■■■■ 27
LSM11P83369 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.157e-22■■■■■ 27
LSM11P83369 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.86□□□□□ -1.153e-6■■■■■ 27
LSM11P83369 AL033504.1-203ENST00000442094 404 ntTSL 37.2□□□□□ -1.263e-6■■■■■ 27
LSM11P83369 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.04□□□□□ -1.283e-6■■■■■ 27
LSM11P83369 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.312e-11■■■■■ 27
LSM11P83369 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.71□□□□□ -1.333e-6■■■■■ 27
LSM11P83369 SAMD5-202ENST00000566741 393 ntTSL 36.71□□□□□ -1.343e-6■■■■■ 27
LSM11P83369 STX17-210ENST00000531035 568 ntTSL 46.61□□□□□ -1.353e-6■■■■■ 27
LSM11P83369 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.54□□□□□ -1.363e-6■■■■■ 27
LSM11P83369 RSRC2-211ENST00000527173 2570 ntTSL 26.22□□□□□ -1.417e-22■■■■■ 27
LSM11P83369 F11-AS1-203ENST00000508287 669 ntTSL 36.06□□□□□ -1.443e-6■■■■■ 27
LSM11P83369 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.58□□□□□ -1.523e-6■■■■■ 27
LSM11P83369 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.53□□□□□ -1.523e-6■■■■■ 27
LSM11P83369 MED13L-207ENST00000551197 489 ntTSL 55.46□□□□□ -1.542e-11■■■■■ 27
LSM11P83369 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.613e-6■■■■■ 27
LSM11P83369 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.8□□□□□ -1.643e-6■■■■■ 27
LSM11P83369 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.683e-6■■■■■ 27
LSM11P83369 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.39□□□□□ -1.713e-6■■■■■ 27
LSM11P83369 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.9□□□□□ -1.783e-6■■■■■ 27
LSM11P83369 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.844e-8■■■■■ 26.9
LSM11P83369 RNF166-205ENST00000562544 502 ntTSL 515.26■□□□□ 0.033e-7■■■■■ 26.9
LSM11P83369 TONSL-202ENST00000497613 6607 ntTSL 213.4□□□□□ -0.261e-6■■■■■ 26.8
LSM11P83369 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.371e-6■■■■■ 26.8
LSM11P83369 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.197e-9■■■■■ 26.8
LSM11P83369 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.017e-9■■■■■ 26.8
LSM11P83369 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.087e-9■■■■■ 26.8
LSM11P83369 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.169e-7■■■■■ 26.8
LSM11P83369 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.442e-8■■■■□ 26.7
LSM11P83369 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.112e-8■■■■□ 26.7
LSM11P83369 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.83□□□□□ -0.22e-8■■■■□ 26.7
LSM11P83369 INTS10-202ENST00000517546 864 ntTSL 213.54□□□□□ -0.242e-8■■■■□ 26.7
LSM11P83369 INTS10-216ENST00000523772 777 ntTSL 513.54□□□□□ -0.242e-8■■■■□ 26.7
LSM11P83369 INTS10-206ENST00000520670 623 ntTSL 513.2□□□□□ -0.32e-8■■■■□ 26.7
LSM11P83369 INTS10-207ENST00000520827 631 ntTSL 311.14□□□□□ -0.632e-8■■■■□ 26.7
LSM11P83369 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.822e-8■■■■□ 26.7
LSM11P83369 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.969e-7■■■■□ 26.6
LSM11P83369 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)19.58■□□□□ 0.731e-6■■■■□ 26.6
LSM11P83369 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.86■□□□□ 0.451e-6■■■■□ 26.6
LSM11P83369 HIST1H4H-204ENST00000635491 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.53e-14■■■■□ 26.6
LSM11P83369 HIST1H4H-202ENST00000634560 1034 ntTSL 1 (best)11.94□□□□□ -0.53e-14■■■■□ 26.6
LSM11P83369 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC8.84□□□□□ -0.993e-14■■■■□ 26.6
LSM11P83369 HIST1H4H-203ENST00000634956 2163 ntTSL 57.11□□□□□ -1.273e-14■■■■□ 26.6
LSM11P83369 RNF126-204ENST00000590885 1436 ntTSL 516.38■□□□□ 0.213e-8■■■■□ 26.6
LSM11P83369 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.972e-7■■■■□ 26.4
LSM11P83369 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.042e-7■■■■□ 26.4
LSM11P83369 ANKRD11-213ENST00000567736 2750 ntTSL 214.2□□□□□ -0.142e-7■■■■□ 26.4
LSM11P83369 ANKRD11-210ENST00000566858 580 ntTSL 413.89□□□□□ -0.192e-7■■■■□ 26.4
LSM11P83369 ANKRD11-212ENST00000567699 412 ntTSL 513.31□□□□□ -0.282e-7■■■■□ 26.4
LSM11P83369 ANKRD11-216ENST00000568924 587 ntTSL 412.37□□□□□ -0.432e-7■■■■□ 26.4
LSM11P83369 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.33□□□□□ -0.442e-7■■■■□ 26.4
LSM11P83369 GDI1-207ENST00000468483 2417 ntTSL 1 (best)12.07□□□□□ -0.482e-7■■■■□ 26.4
LSM11P83369 SON-208ENST00000455528 8394 ntTSL 1 (best)11.02□□□□□ -0.655e-8■■■■□ 26.4
LSM11P83369 AKT1-212ENST00000555380 534 ntTSL 410.43□□□□□ -0.742e-7■■■■□ 26.4
LSM11P83369 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.15□□□□□ -0.785e-8■■■■□ 26.4
LSM11P83369 SON-219ENST00000491794 995 ntTSL 210.11□□□□□ -0.795e-8■■■■□ 26.4
LSM11P83369 GDI1-214ENST00000491154 4069 ntTSL 29.29□□□□□ -0.922e-7■■■■□ 26.4
LSM11P83369 SON-217ENST00000478183 1818 ntTSL 1 (best)8.89□□□□□ -0.995e-8■■■■□ 26.4
LSM11P83369 SON-207ENST00000436227 5269 ntAPPRIS P1 TSL 57.4□□□□□ -1.235e-8■■■■□ 26.4
LSM11P83369 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.39□□□□□ -1.555e-8■■■■□ 26.4
LSM11P83369 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.567e-8■■■■□ 26.4
LSM11P83369 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.44■□□□□ 0.067e-7■■■■□ 26.3
LSM11P83369 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.32■□□□□ 0.047e-7■■■■□ 26.3
LSM11P83369 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.91□□□□□ -0.027e-7■■■■□ 26.3
LSM11P83369 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.947e-7■■■■□ 26.3
LSM11P83369 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.191e-6■■■■□ 26.3
LSM11P83369 SLC38A10-207ENST00000542075 2903 ntTSL 213.44□□□□□ -0.261e-6■■■■□ 26.3
LSM11P83369 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.12■□□□□ 0.818e-7■■■■□ 26.2
LSM11P83369 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.44■□□□□ 0.228e-7■■■■□ 26.2
LSM11P83369 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.098e-7■■■■□ 26.2
LSM11P83369 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.55■□□□□ 0.088e-7■■■■□ 26.2
LSM11P83369 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.258e-7■■■■□ 26.2
LSM11P83369 GAK-207ENST00000505819 1326 ntTSL 518.85■□□□□ 0.613e-6■■■■□ 26.2
LSM11P83369 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.39□□□□□ -0.113e-6■■■■□ 26.2
LSM11P83369 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.43□□□□□ -0.263e-6■■■■□ 26.2
LSM11P83369 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.283e-6■■■■□ 26.2
LSM11P83369 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.89■□□□□ 0.454e-12■■■■□ 26.2
LSM11P83369 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.294e-12■■■■□ 26.2
LSM11P83369 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.294e-12■■■■□ 26.2
LSM11P83369 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.69■□□□□ 0.14e-12■■■■□ 26.2
LSM11P83369 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.28■□□□□ 0.044e-12■■■■□ 26.2
LSM11P83369 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.01□□□□□ -0.174e-12■■■■□ 26.2
LSM11P83369 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.274e-12■■■■□ 26.2
LSM11P83369 METTL26-206ENST00000448973 1710 ntTSL 1 (best)21.49■■□□□ 1.032e-7■■■■□ 26.1
LSM11P83369 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.15■□□□□ 0.52e-7■■■■□ 26.1
LSM11P83369 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.342e-7■■■■□ 26.1
LSM11P83369 METTL26-209ENST00000565163 485 ntTSL 316.7■□□□□ 0.262e-7■■■■□ 26.1
Retrieved 100 of 11,495 protein–RNA pairs in 51.3 ms