Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CLDN5O00501 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CLDN5O00501 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CLDN5O00501 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.2■■□□□ 1.62
CLDN5O00501 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
CLDN5O00501 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CLDN5O00501 AC145676.1-201ENST00000514988 2004 ntBASIC25.19■■□□□ 1.62
CLDN5O00501 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.19■■□□□ 1.62
CLDN5O00501 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CLDN5O00501 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CLDN5O00501 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.19■■□□□ 1.62
CLDN5O00501 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CLDN5O00501 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CLDN5O00501 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLDN5O00501 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLDN5O00501 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.18■■□□□ 1.62
CLDN5O00501 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLDN5O00501 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CLDN5O00501 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.18■■□□□ 1.62
CLDN5O00501 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLDN5O00501 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLDN5O00501 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CLDN5O00501 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLDN5O00501 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
CLDN5O00501 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLDN5O00501 AC097639.1-201ENST00000565519 1891 ntBASIC25.17■■□□□ 1.62
CLDN5O00501 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLDN5O00501 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLDN5O00501 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLDN5O00501 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLDN5O00501 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLDN5O00501 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CLDN5O00501 AC103724.3-201ENST00000564481 992 ntBASIC25.16■■□□□ 1.62
CLDN5O00501 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLDN5O00501 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLDN5O00501 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLDN5O00501 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.15■■□□□ 1.62
CLDN5O00501 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CLDN5O00501 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CLDN5O00501 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.14■■□□□ 1.62
CLDN5O00501 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CLDN5O00501 AL451085.2-201ENST00000605085 799 ntBASIC25.14■■□□□ 1.62
CLDN5O00501 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.14■■□□□ 1.62
CLDN5O00501 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CLDN5O00501 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLDN5O00501 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLDN5O00501 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLDN5O00501 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLDN5O00501 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.13■■□□□ 1.61
CLDN5O00501 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.13■■□□□ 1.61
CLDN5O00501 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.13■■□□□ 1.61
CLDN5O00501 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLDN5O00501 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CLDN5O00501 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLDN5O00501 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLDN5O00501 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.12■■□□□ 1.61
CLDN5O00501 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.12■■□□□ 1.61
CLDN5O00501 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CLDN5O00501 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.12■■□□□ 1.61
CLDN5O00501 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLDN5O00501 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLDN5O00501 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLDN5O00501 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.11■■□□□ 1.61
CLDN5O00501 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.11■■□□□ 1.61
CLDN5O00501 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CLDN5O00501 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
CLDN5O00501 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLDN5O00501 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CLDN5O00501 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.1■■□□□ 1.61
CLDN5O00501 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLDN5O00501 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.1■■□□□ 1.61
CLDN5O00501 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLDN5O00501 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.09■■□□□ 1.61
CLDN5O00501 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLDN5O00501 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLDN5O00501 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLDN5O00501 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.09■■□□□ 1.61
CLDN5O00501 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.09■■□□□ 1.61
CLDN5O00501 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLDN5O00501 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLDN5O00501 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLDN5O00501 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.08■■□□□ 1.61
CLDN5O00501 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLDN5O00501 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLDN5O00501 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLDN5O00501 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
CLDN5O00501 AL031848.2-201ENST00000607670 837 ntBASIC25.07■■□□□ 1.6
CLDN5O00501 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.07■■□□□ 1.6
CLDN5O00501 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.07■■□□□ 1.6
CLDN5O00501 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
CLDN5O00501 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.06■■□□□ 1.6
CLDN5O00501 FOXO3B-201ENST00000395675 1928 ntBASIC25.06■■□□□ 1.6
CLDN5O00501 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.06■■□□□ 1.6
CLDN5O00501 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CLDN5O00501 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
CLDN5O00501 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CLDN5O00501 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CLDN5O00501 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLDN5O00501 AL592295.1-201ENST00000400984 884 ntBASIC25.05■■□□□ 1.6
CLDN5O00501 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms